User profiles for Tao Pan

Tao Pan

Professor of Biochemistry and Molecular Biology, University of Chicago
Verified email at uchicago.edu
Cited by 37185

Dynamic RNA modifications in gene expression regulation

IA Roundtree, ME Evans, T Pan, C He - Cell, 2017 - cell.com
Over 100 types of chemical modifications have been identified in cellular RNAs. While the 5′
cap modification and the poly(A) tail of eukaryotic mRNA play key roles in regulation, …

Efficient and quantitative high-throughput tRNA sequencing

…, WC Clark, Q Dai, C Yi, C He, AM Lambowitz, T Pan - Nature …, 2015 - nature.com
Despite its biological importance, tRNA has not been adequately sequenced by standard
methods because of its abundant post-transcriptional modifications and stable structure, which …

N6-methyladenosine-dependent regulation of messenger RNA stability

…, D Han, Y Fu, M Parisien, Q Dai, G Jia, B Ren, T Pan… - Nature, 2014 - nature.com
N 6 -methyladenosine (m 6 A) is the most prevalent internal (non-cap) modification present
in the messenger RNA of all higher eukaryotes 1 , 2 . Although essential to cell viability and …

Spatiotemporal patterns and characteristics of land-use change in China during 2010–2015

…, C Yan, R Li, S Wu, Y Hu, G Du, W Chi, T Pan… - Journal of Geographical …, 2018 - Springer
Land use/cover change is an important theme on the impacts of human activities on the
earth systems and global environmental change. National land-use changes of China during …

Modifications and functional genomics of human transfer RNA

T Pan - Cell research, 2018 - nature.com
Transfer RNA (tRNA) is present at tens of millions of transcripts in a human cell and is the
most abundant RNA in moles among all cellular RNAs. tRNA is also the most extensively …

RNA folding during transcription

T Pan, T Sosnick - Annu. Rev. Biophys. Biomol. Struct., 2006 - annualreviews.org
The evolution of RNA sequence needs to satisfy three requirements: folding, structure, and
function. Studies on folding during transcription are related directly to folding in the cell. …

N6-methyladenosine-dependent RNA structural switches regulate RNA–protein interactions

N Liu, Q Dai, G Zheng, C He, M Parisien, T Pan - Nature, 2015 - nature.com
RNA-binding proteins control many aspects of cellular biology through binding single-stranded
RNA binding motifs (RBMs) 1 , 2 , 3 . However, RBMs can be buried within their local …

Innate immune and chemically triggered oxidative stress modifies translational fidelity

…, P Berglund, JR Bennink, JW Yewdell, T Pan - Nature, 2009 - nature.com
Translational fidelity, essential for protein and cell function, requires accurate transfer RNA (tRNA)
aminoacylation. Purified aminoacyl-tRNA synthetases exhibit a fidelity of one error per …

N6-Methyladenosine in nuclear RNA is a major substrate of the obesity-associated FTO

…, Q Dai, G Zheng, Y Yang, C Yi, T Lindahl, T Pan… - Nature chemical …, 2011 - nature.com
We report here that fat mass and obesity-associated protein (FTO) has efficient oxidative
demethylation activity targeting the abundant N6-methyladenosine (m 6 A) residues in RNA in …

[HTML][HTML] An evolutionarily conserved mechanism for controlling the efficiency of protein translation

…, K Vestsigian, S Navon, Y Dorfan, J Zaborske, T Pan… - Cell, 2010 - cell.com
Recent years have seen intensive progress in measuring protein translation. However, the
contributions of coding sequences to the efficiency of the process remain unclear. Here, we …