User profiles for Axel T. Brünger

Axel Brunger

Professor of Molecular and Cellular Physiology, Stanford University
Verified email at stanford.edu
Cited by 91569

[BOOK][B] X-PLOR: version 3.1: a system for x-ray crystallography and NMR

AT Brünger - 1992 - books.google.com
X-PLOR is a highly sophisticated computer program that provides an interface between
theoretical foundations and experimental data in structural biology, with specific emphasis on X-…

Free R value: a novel statistical quantity for assessing the accuracy of crystal structures

AT Brünger - Nature, 1992 - nature.com
and trimethylamine dehydrogenase". Page 1 LETTERS TO NATURE and trimethylamine
dehydrogenase". Our results show that structural diversity prevails within the NADP-dependent …

Crystallography & NMR system: A new software suite for macromolecular structure determination

AT Brünger, PD Adams, GM Clore… - Biological …, 1998 - journals.iucr.org
A new software suite, called Crystallography & NMR System (CNS), has been developed for
macromolecular structure determination by X-ray crystallography or solution nuclear …

Assessment of phase accuracy by cross validation: the free R value. Methods and applications

AT Brünger - Biological Crystallography, 1993 - journals.iucr.org
Analogies between the free R statistic [Brünger (1992). Nature (London), 355, 472–474]
and the statistical methods of cross validation and bootstrap are discussed. Several new …

Crystallographic R Factor Refinement by Molecular Dynamics

AT Brünger, J Kuriyan, M Karplus - Science, 1987 - science.org
Molecular dynamics was used to refine macromolecular structures by incorporating the
difference between the observed crystallographic structure factor amplitude and that calculated …

A new generation of crystallographic validation tools for the protein data bank

RJ Read, PD Adams, WB Arendall, AT Brunger… - Structure, 2011 - cell.com
This report presents the conclusions of the X-ray Validation Task Force of the worldwide
Protein Data Bank (PDB). The PDB has expanded massively since current criteria for validation …

Checking your imagination: applications of the free R value

GJ Kleywegt, AT Brünger - Structure, 1996 - cell.com
In 1990, Brändén and Jones [1] suggested that the process of electron-density map interpretation
involves a degree of subjectivity on the part of the crystallographer. In the worst case, …

Structural changes are associated with soluble N-ethylmaleimide-sensitive fusion protein attachment protein receptor complex formation

…, H Otto, WK Eliason, R Jahn, AT Brunger - Journal of Biological …, 1997 - jbc.org
SNAP-25, syntaxin, and synaptobrevin play a key role in the regulated exocytosis of
synaptic vesicles, but their mechanism of action is not understood. In vitro, the proteins …

Model bias in macromolecular crystal structures

A Hodel, SH Kim, AT Brünger - Foundations of Crystallography, 1992 - journals.iucr.org
Reduction of model bias in macromolecular crystallography through various omit-map
techniques has been investigated. The two cases studied were the p21 protein complexed with …

Determination of three-dimensional structures of proteins by simulated annealing with interproton distance restraints. Application to crambin, potato carboxypeptidase …

M Nilges, AM Gronenborn, AT Brünger… - … , Design and Selection, 1988 - academic.oup.com
An automated method, based on the principle of simulated annealing, is presented for
determining the three-dimensional structures of proteins on the basis of short (<5 Å) interproton …